New Release: v1.3.0
In this release we have three new modules, a tool update, and a guide for user contribution.
New features include:
New Cytokine Network module: Explore the extracellular networks modulating tumoral immune response, encompassing direct interaction among cells and communication via soluble proteins such as cytokines to mediate interactions among those cells.
New Copy-number Correlation module: Explore statistical associations between immune readouts and gene-level copy number variations.
New Cell-interaction Diagram module: This module allows you to depict the estimated abundance of tumor cells and representative innate and adaptive cells in the microenvironment, along with the abundance of receptor and ligands mediating interactions between those cells.
Added Contributing Guide for pointers on how to get started on a new module.
Contact us for information on including your module on iAtlas!
- Addition of small text output and a table to show any missing genes needed by the immune-subtype classifier.
- The iAtlas team is grateful to Allison Kudla of the Institute for Systems Biology for producing the cell-interaction diagram image file and for being patient with multiple requests for modifications. Thanks Allison!